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Public databases of interaction data

Data from our publications can be viewed | downloaded from the links below


  • PRIDE
  • Proteomic
  • Rewiring of the Human Mitochondrial Interactome During Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis
    PXD009831
    PXD009832
    PXD009833
    PXD009834

  • Global landscape of cell envelope protein complexes in Escherichia coli.
    Babu et al.(2018)
    PXD006247

  • A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Molecular Determinants in Redox Homeostasis and NF-κB Signaling.
    Malty et al. (2017)
    PXD006690

  • IntAct
  • Proteomic
  • Binary Protein-protein Interaction Landscape of Escherichia coli.
    Rajagopala et al (Nat Biotechnol. 2014)
    Rajagopala et al (Nat Biotechnol. 2014)

  • BioGRID
  • Proteomic
  • Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis.
    Moutaoufik et al. (iScience, 2019)
    219517

  • Global landscape of cell envelope protein complexes in Escherichia coli.
    Babu et al. (Nat. Biotechnol., 2018)
    206197

  • A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling.
    Malty et al. (Cell Syst., 2017)
    206200

  • Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae.
    Babu et al. (Nature, 2012)
    142229

  • Genetic
  • Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli. Kumar et al.
    (Cell Rep., 2016)
    189390

  • DIP
  • Proteomic
  • Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins
    Hu et al. (PLoS Biology 2009)
    Hu et al. (PLoS Biology 2009)


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Lab Resource Collections

Escherichia coli

  • Sequential peptide affinity tagging collection
  • Yellow fluorescent protein tagging collection
  • GFP free over expression collection with histidine tag
  • F- Single gene deletion knockout collection
  • Hfr gene deletion knockout collection

Saccharomyces Cerevisiae

  • Tandem affinity tag collection
  • MORF over expression collection
  • GFP collection
  • Single gene deletion knockout collection

Homo Sapiens



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Lab Resource Databases

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Trackers & Websites

Escherichia coli

Saccharomyces cerevisiae

Homo sapiens

Sample Shipment Tracker

MS Sample Submission Forms


Strain Collection Locations

Escherichia coli

Saccharomyces cerevisiae

Homo sapiens



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